Loïs

Loïs Maignien

Assistant Professor

Research Interests

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Personal Interests

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Education

Degree Field Institution Year(s) Advisor
Ph.D. microbial ecology Ghent University 2006 - 2011
MSc. Cellular and Molecular Biology Wageningen University 2002 - 2003
MSc. Bioengineering Montpellier University 1999 - 2003

Experience

Position Field Institution Year(s) Advisor
Adjunct researcher microbial ecology Marine Biological Laboratory 2013 - Present
Assistant Professor microbial ecology The University of Western Brittany (UBO) 2013 - Present
Postdoctoral Researcher microbial ecology Marine Biological Laboratory 2011 - 2013

Publications

  • Hubbard CJ, Brock MT, van Diepen LT, Maignien L, Ewers BE, et al. (2018). The plant circadian clock influences rhizosphere community structure and function. ISME J 12(2): 400-410. PubMed ISME J

  • Gaboyer F, Maignien L, Jebbar M, Alain K (2017). Draft Genome Sequence of <i>Phaeobacter leonis</i> Type Strain 306, an Alphaproteobacterium Isolated from Mediterranean Sea Sediments. Genome Announc 5(26). PubMed Genome Announc

  • Gaboyer F, Maignien L, Jebbar M, Alain K (2017). Draft Genome of <i>Halomonas lionensis</i> RHS90<sup>T</sup>, a Stress-Tolerant Gammaproteobacterium Isolated from Mediterranean Sea Sediments. Genome Announc 5(23). PubMed Genome Announc

  • Courtine D, Alain K, Georges M, Bienvenu N, Morrison HG, et al. (2017). Complete Genome Sequence of Hyperthermophilic Archaeon <i>Thermococcus</i> sp. EXT12c, Isolated from the East Pacific Rise 9°N. Genome Announc 5(50). PubMed Genome Announc

  • Dalmasso C, Oger P, Courtine D, Georges M, Takai K, et al. (2016). Erratum for Dalmasso et al., Complete Genome Sequence of the Hyperthermophilic and Piezophilic Archaeon Thermococcus piezophilus CDGST, Able To Grow under Extreme Hydrostatic Pressures. Genome Announc 4(5). PubMed Genome Announc

  • Dalmasso C, Oger P, Courtine D, Georges M, Takai K, et al. (2016). Complete Genome Sequence of the Hyperthermophilic and Piezophilic Archeon Thermococcus piezophilus CDGST, Able To Grow under Extreme Hydrostatic Pressures. Genome Announc 4(4). PubMed Genome Announc

  • Cao J, Maignien L, Shao Z, Alain K, Jebbar M (2016). Genome Sequence of the Piezophilic, Mesophilic Sulfate-Reducing Bacterium Desulfovibrio indicus J2T. Genome Announc 4(2). PubMed Genome Announc

  • Dalmasso C, Oger P, Selva G, Courtine D, L'Haridon S, et al. (2016). Thermococcus piezophilus sp. nov., a novel hyperthermophilic and piezophilic archaeon with a broad pressure range for growth, isolated from a deepest hydrothermal vent at the Mid-Cayman Rise. Syst Appl Microbiol 39(7): 440-444. PubMed Syst Appl Microbiol

  • Eren AM, Sogin ML, Maignien L (2016). Editorial: New Insights into Microbial Ecology through Subtle Nucleotide Variation. Front Microbiol 7: 1318. PubMed Front Microbiol

  • Chafee M, Maignien L, Simmons SL (2015). The effects of variable sample biomass on comparative metagenomics. Environ Microbiol 17(7): 2239-53. PubMed Environ Microbiol

  • Reveillaud J, Maignien L, Murat Eren A, Huber JA, Apprill A, et al. (2014). Host-specificity among abundant and rare taxa in the sponge microbiome. ISME J 8(6): 1198-209. PubMed ISME J

  • Maignien L, DeForce EA, Chafee ME, Eren AM, Simmons SL (2014). Ecological succession and stochastic variation in the assembly of Arabidopsis thaliana phyllosphere communities. MBio 5(1): e00682-13. PubMed MBio

  • Zhang Y, Maignien L, Stadnitskaia A, Boeckx P, Xiao X, et al. (2014). Stratified community responses to methane and sulfate supplies in mud volcano deposits: insights from an in vitro experiment. PLoS One 9(11): e113004. PubMed PLoS One

  • Marzorati M, Maignien L, Verhelst A, Luta G, Sinnott R, et al. (2013). Barcoded pyrosequencing analysis of the microbial community in a simulator of the human gastrointestinal tract showed a colon region-specific microbiota modulation for two plant-derived polysaccharide blends. Antonie Van Leeuwenhoek 103(2): 409-20. PubMed Antonie Van Leeuwenhoek

  • Eren AM, Maignien L, Sul WJ, Murphy LG, Grim SL, et al. (2013). Oligotyping: Differentiating between closely related microbial taxa using 16S rRNA gene data. Methods Ecol Evol 4(12). PubMed Methods Ecol Evol

  • Possemiers S, Pinheiro I, Verhelst A, Van den Abbeele P, Maignien L, et al. (2013). A dried yeast fermentate selectively modulates both the luminal and mucosal gut microbiota and protects against inflammation, as studied in an integrated in vitro approach. J Agric Food Chem 61(39): 9380-92. PubMed J Agric Food Chem

  • Maignien L, Parkes RJ, Cragg B, Niemann H, Knittel K, et al. (2013). Anaerobic oxidation of methane in hypersaline cold seep sediments. FEMS Microbiol Ecol 83(1): 214-31. PubMed FEMS Microbiol Ecol

  • Zhang Y, Maignien L, Zhao X, Wang F, Boon N (2011). Enrichment of a microbial community performing anaerobic oxidation of methane in a continuous high-pressure bioreactor. BMC Microbiol 11: 137. PubMed BMC Microbiol

  • Vlaeminck SE, Hay AG, Maignien L, Verstraete W (2011). In quest of the nitrogen oxidizing prokaryotes of the early Earth. Environ Microbiol 13(2): 283-95. PubMed Environ Microbiol

  • Liu Y, De Schryver P, Van Delsen B, Maignien L, Boon N, et al. (2010). PHB-degrading bacteria isolated from the gastrointestinal tract of aquatic animals as protective actors against luminescent vibriosis. FEMS Microbiol Ecol 74(1): 196-204. PubMed FEMS Microbiol Ecol

  • Boeckaert C, Morgavi DP, Jouany JP, Maignien L, Boon N, et al. (2009). Role of the protozoan Isotricha prostoma, liquid-, and solid-associated bacteria in rumen biohydrogenation of linoleic acid. Animal 3(7): 961-71. PubMed

  • Boeckaert C, Vlaeminck B, Fievez V, Maignien L, Dijkstra J, et al. (2008). Accumulation of trans C18:1 fatty acids in the rumen after dietary algal supplementation is associated with changes in the Butyrivibrio community. Appl Environ Microbiol 74(22): 6923-30. PubMed Appl Environ Microbiol

  • Rabaey K, Van de Sompel K, Maignien L, Boon N, Aelterman P, et al. (2006). Microbial fuel cells for sulfide removal. Environ Sci Technol 40(17): 5218-24. PubMed